Semi-automated Tidal Creek Parameter Extraction Algorithm

Using a semi-automated algorithm to extract relevant parameters from LiDAR data for salt marsh restoration in the historic Ashleyville area of Charleston, SC.

This work was conducted as part of a larger project led by the South Carolina Department of Natural Resources to restore 7 acres of salt marsh in the Ashleyville area of Charleston, South Carolina. During my internship with Robinson Design Engineers, I utilized a semi-automated tidal creek extraction algorithm developed by (Chirol et al., 2018) to calculate quantitative parameters about the restoration site and reference tidal creek systems to guide the project design.

Extent of the Old Town Creek tidal watershed within Charleston, South Carolina.

The restoration site is located in the Maryville region: one of the most historically prominent African American towns seen as a model of Black self-government. Ashleyville is the area of Maryville that is closest to the Ashley River. The community was established by former slaves and their descendants to establish property and businesses in the Jim Crow-era South.

The project came about from a citizen science program where community members were encouraged to document changes in sea level and pollution in the marshes of Charleston. Through this initiative, one of the residents of Maryville brought attention to the marsh die-off occuring in his backyard. From their, the community rallied collaborators to tackle the restoration of this degraded marsh.

Normalized Difference Vegetation Index (NDVI) for the Old Town Creek watershed.

For this phase of the project, I was tasked with finding metrics that could be calculated for the restoration site and various tidal creek reference systems to guide the restoration strategy and establish long-term monitoring methods.

To monitor salt marsh vegetation health, a critical factor in determining the extent of marsh die-back, the Normalized Difference Vegetation Index (NDVI) can be utilized. NDVI quantifies the greenness of an area using remote sensing imagery with red and near-infrared bands and has a well-established relationship with vegetation productivity ((Miller et al., 2017), (Rolando et al., 2023), (Sun et al., 2018)). To establish initial vegetation conditions for the watershed, I calculated the median NDVI from Sentinel-2 images over a 2-year period using Google Earth Engine.

Examples of some of the parameters calculated for the Old Towne Creek tidal creek system using the Chirol algorithm.

The creek extraction algorithm I used has the capability of extracting a comprehensive suite of morphological creek characteristics in both mature and created salt marshes using only LiDAR data. By using slope and elevation thresholds to determine the creek area, the algorithm calculates amplitude, channel length, sinuosity ratio, junction angle, width, depth, cross-sectional area, creek order, bifurcation ratio, drainage density, and overmarsh path length. The results were found to closely match field-validated results, and were significantly faster and less subjective to produce.

Salt marshes are often difficult to access for field surveys due to the thick mud and constantly changing water levels from the tides. Therefore, these remote sensing methods have great potential for cost-effective long-term monitoring of creek morphological evolution and vegetation health in both mature and managed salt marshes.

References

2023

  1. Restoration and resilience to sea level rise of a salt marsh affected by dieback events.
    J. Rolando, M. Hodges, K. Garcia, and 7 more authors
    Ecosphere, 2023

2018

  1. Parametrizing tidal creek morphology in mature saltmarshes using semi-automated extraction from lidar
    C. Chirol, I. Haigh, Pontee N., and 2 more authors
    Remote Sensing of Environment, 2018
  2. Classification mapping of salt marsh vegetation by flexible monthly NDVI time-series using Landsat imagery.
    C. Sun, S. Fagherazzi, and Y. Liu
    2018

2017

  1. Mapping Salt Marsh Dieback And Condition In South Carolina’S North Inlet-Winyah Bay National Estuarine Research Reserve Using Remote Sensing.
    G. Miller, J. Morris, and C. Wang
    2017